Data Algorithms: Recipes for Scaling Up with Hadoop and by Mahmoud Parsian

By Mahmoud Parsian

When you are able to dive into the MapReduce framework for processing huge datasets, this useful booklet takes you step-by-step in the course of the algorithms and instruments you want to construct dispensed MapReduce functions with Apache Hadoop or Apache Spark. each one bankruptcy presents a recipe for fixing an enormous computational challenge, equivalent to development a advice approach. You'll how to enforce the proper MapReduce answer with code so you might use on your projects.

Dr. Mahmoud Parsian covers simple layout styles, optimization ideas, and knowledge mining and computer studying ideas for difficulties in bioinformatics, genomics, information, and social community research. This e-book additionally contains an outline of MapReduce, Hadoop, and Spark.

Topics include:
•Market basket research for a wide set of transactions
•Data mining algorithms (K-means, KNN, and Naive Bayes)
•Using large genomic facts to series DNA and RNA
•Naive Bayes theorem and Markov chains for info and industry prediction
•Recommendation algorithms and pairwise record similarity
•Linear regression, Cox regression, and Pearson correlation
•Allelic frequency and mining DNA
•Social community research (recommendation platforms, counting triangles, sentiment analysis)

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2. Let the MapReduce execution framework do the sorting (rather than sorting in memory, let the framework sort by using the cluster nodes). 3. Preserve state across multiple key-value pairs to handle processing; you can achieve this by having proper mapper output partitioners (for example, we partition the mapper’s output by the natural key). Implementation Details To implement the secondary sort feature, we need additional plug-in Java classes. We have to tell the MapReduce/Hadoop framework: Solutions to the Secondary Sort Problem | 3 • How to sort reducer keys • How to partition keys passed to reducers (custom partitioner) • How to group data that has arrived at each reducer Sort order of intermediate keys To accomplish secondary sorting, we need to take control of the sort order of inter‐ mediate keys and the control order in which reducers process keys.

Com. com/oreillymedia Acknowledgments To each reader: a big thank you for reading my book. I hope that this book is useful and serves you well. Thank you to my editor at O’Reilly, Ann Spencer, for believing in my book project, supporting me in reorganizing the chapters, and suggesting a new title (originally, I proposed a title of MapReduce for Hackers). Also, I want to thank Mike Loukides (VP of Content Strategy for O’Reilly Media) for believing in and supporting my book project. Thank you so much to my editor, Marie Beaugureau, data and development editor at O’Reilly, who has worked with me patiently for a long time and supported me during every phase of this project.

For example, in this step, to sort our values, we have to copy them into another list first. Immutability applies to the RDD itself and its elements. Example 1-16. Step 9: sort the reducer’s values in memory 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 // Step 9: sort the reducer's values; this will give us the final output. // Option #1: worked // mapValues[U](f: (V) => U): JavaPairRDD[K, U] // Pass each value in the key-value pair RDD through a map function // without changing the keys; // this also retains the original RDD's partitioning.

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